In fact, if I change
info = LAPACKE_dgtsv(LAPACK_ROW_MAJOR, ...)
to
info = LAPACKE_dgtsv(LAPACK_COL_MAJOR, ...)
then my function works:
test_trisolve2.test_trisolve() 0 || x - x_hat || = 6.67064747632e-12
Last Updated : 29 Mar, 2019
Output :
GCD : 4
Division : (4, 2)
Average : 2.0
pt1 : <capsule object "Point" at 0x1005d1e70>
pt2 : <capsule object "Point" at 0x1005d1ea0>
Distance between the two points : 2.8284271247461903
Updated: May 03, 2018
void hello(const char * name) {
printf("hello %s\n", name);
}
$ gcc - c examples.c $ ar rcs libexamples.a examples.o
CC = gcc
default: libexamples.a
libexamples.a: examples.o
ar rcs $ @ $ ^
examples.o: examples.c examples.h
$(CC) - c $ <
clean:
rm * .o * .a
$ pip3 install cython
cdef extern from "examples.h":
void hello(const char * name)
def py_hello(name: bytes) - > None:
hello(name)
from distutils.core
import setup
from distutils.extension
import Extension
from Cython.Build
import cythonize
examples_extension = Extension(
name = "pyexamples",
sources = ["pyexamples.pyx"],
libraries = ["examples"],
library_dirs = ["lib"],
include_dirs = ["lib"]
)
setup(
name = "pyexamples",
ext_modules = cythonize([examples_extension])
)
I am writing a Python module that includes Cython extensions and uses LAPACK (and BLAS). I am open to using either clapack or lapacke, or some kind of f2c or f2py solution if necessary. What is important is that I am able to call lapack and blas routines from Cython in tight loops without Python call overhead., 6 days ago Distributing Cython based extensions using LAPACK. Iterate through table rows and print column text with Python Selenium. What is the best way to map windows drives using … ,This works because, on my macbook, the clapack.h header file is in the same directory as cblas.h. I can then do this in my pyx file:, Note that some legacy builtins are automatically remapped from their Python 2 names to their Python 3 names by Cython when building in Python 3.x, so that they do not get in the way even if this option is enabled. Cython.Compiler.Options.gcc_branch_hints=True¶
from distutils.core import setup from distutils.extension import Extension from Cython.Distutils import build_ext import numpy from Cython.Build import cythonize from numpy.distutils.system_info import get_info # TODO: This cannot be the right way blas_include = get_info('blas_opt')['extra_compile_args'][1][2: ] includes = [blas_include, numpy.get_include()] setup(cmdclass = { 'build_ext': build_ext }, ext_modules = cythonize([Extension("cylapack", ["cylapack.pyx"], include_dirs = includes, libraries = ['blas', 'lapack'])]))
from distutils.core import setup from distutils.extension import Extension from Cython.Distutils import build_ext import numpy from Cython.Build import cythonize from numpy.distutils.system_info import get_info # TODO: This cannot be the right way blas_include = get_info('blas_opt')['extra_compile_args'][1][2: ] includes = [blas_include, numpy.get_include()] setup(cmdclass = { 'build_ext': build_ext }, ext_modules = cythonize([Extension("cylapack", ["cylapack.pyx"], include_dirs = includes, libraries = ['blas', 'lapack'])]))
ctypedef np.int32_t integer cdef extern from "cblas.h": double cblas_dnrm2(int N, double * X, int incX) cdef extern from "clapack.h": integer dgelsy_(integer * m, integer * n, integer * nrhs, double * a, integer * lda, double * b, integer * ldb, integer * jpvt, double * rcond, integer * rank, double * work, integer * lwork, integer * info)
from scipy.linalg.cython_blas cimport dnrm2 from scipy.linalg.cython_lapack cimport dgelsy